Zinc Binding Site: 6N61-2

PDB

6N61 (Escherichia coli RNA polymerase sigma70-holoenzyme bound to upstream fork promoter DNA and Capistruin)

Metals (3 Coordination)

D:1503 (ZN)

Liganding Residues (C3)

D.814 (CYS)
D.888 (CYS)
D.895 (CYS)
30 equivalent sites.
3LU0-1
residues D.888 (CYS), D.895 (CYS), D.898 (CYS)
4JK2-2
residues D.814 (CYS), D.888 (CYS), D.898 (CYS)
4JKR-1
residues D.70 (CYS), D.72 (CYS), D.88 (CYS)
4KN7-2
residues D.814 (CYS), D.888 (CYS), D.898 (CYS)
4LJZ-1
residues D.70 (CYS), D.72 (CYS), D.85 (CYS)
4LK0-1
residues J.70 (CYS), J.72 (CYS), J.85 (CYS)
4LK1-1
residues J.70 (CYS), J.72 (CYS), J.85 (CYS)
4XSY-1
residues D.70 (CYS), D.72 (CYS), D.85 (CYS)
4XSZ-1
residues D.70 (CYS), D.72 (CYS), D.85 (CYS)
4YFK-1
residues D.70 (CYS), D.72 (CYS), D.85 (CYS)
4YLN-1
residues P.70 (CYS), P.85 (CYS), P.88 (CYS)
4ZH3-1
residues J.70 (CYS), J.72 (CYS), J.85 (CYS)
4ZH4-1
residues J.70 (CYS), J.72 (CYS), J.85 (CYS)
5BYH-1
residues D.70 (CYS), D.72 (CYS), D.85 (CYS)
5MY1-1
residues Y.70 (CYS), Y.72 (CYS), Y.85 (CYS)
5NWT-1
residues D.70 (CYS), D.72 (CYS), D.85 (CYS)
5NWT-2
residues D.814 (CYS), D.888 (CYS), D.895 (CYS)
5UAJ-1
residues D.70 (CYS), D.72 (CYS), D.85 (CYS)
5UAL-1
residues D.70 (CYS), D.72 (CYS), D.85 (CYS)
5UI8-2
residues J.814 (CYS), J.888 (CYS), J.898 (CYS)
6ALF-1
residues J.72 (CYS), J.85 (CYS), J.88 (CYS)
6ASX-1
residues J.70 (CYS), J.72 (CYS), J.85 (CYS)
6B6H-2
residues D.814 (CYS), D.888 (CYS), D.898 (CYS)
6BJS-1
residues J.72 (CYS), J.85 (CYS), J.88 (CYS)
6C6T-1
residues J.70 (CYS), J.72 (CYS), J.85 (CYS)
6C6U-1
residues J.70 (CYS), J.72 (CYS), J.85 (CYS)
6CA0-2
residues D.814 (CYS), D.888 (CYS), D.898 (CYS)
6CUX-1
residues D.70 (CYS), D.72 (CYS), D.85 (CYS)
6FLQ-1
residues D.70 (CYS), D.72 (CYS), D.88 (CYS)
6FLQ-2
residues D.814 (CYS), D.888 (CYS), D.895 (CYS)
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Chain D Spacers: 73, 6

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PDB Information

Code: 6N61
Classification: TRANSFERASE/DNA
Resolution: 3.25 Å
R-factor: 0.2726
Keywords: Capistruin, Complex, Inhibitor, Lasso peptide, RNA polymerase, TRANSFERASE-DNA complex
Deposition Date: 24 November, 2018
Experimental Technique: X-RAY DIFFRACTION
Source Organism:
Expression System:
Biological Assembly: 1